Sandrine Dudoit

Latest

• Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
• Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effects
• Finding All Significant Closed Connected Subgraphs
• Improving replicability in single-cell RNA-Seq cell type discovery with Dune
• Trajectory-based differential expression analysis for single-cell sequencing data