tradeSeq

Trajectory inference, Differential Expression and clustering along developmental trajectories in single cell RNA-Sequencing.

Trajectory inference is often used with single-cell RNA-seq data to study dynamic changes in gene expression levels during, e.g., cell cycle, differentiation, or cellular activation. Downstream of trajectory inference, researchers are often interested in discovering genes that are associated with a particular lineage in the trajectory.

Unlocking the power of continuity in single cell RNA-Seq - Differential gene Expression along developmental trajectories.

Trajectory inference is often used with single-cell RNA-seq data to study dynamic changes in gene expression levels during, e.g., cell cycle, differentiation, or cellular activation. Downstream of trajectory inference, researchers are often interested in discovering genes that are associated with a particular lineage in the trajectory.