Those are the functions used for the first step of the condiments workflow
imbalance_score()
Imbalance Score
topologyTest()
Differential Topology Test
Those are the functions used for the second step of the condiments workflow
differentiationTest()
Differential Differentiation Test
progressionTest()
Differential Progression Test
This is all the tools to create toy datasets in order to run the examples or discover the other functions
toy_dataset
A toy dataset used in the vignette and in the examples
create_differential_topology()
Create Example function
A few helpful functions to run slinghsot when under multiple conditions.
merge_sds()
Merge slingshots datasets
nLineages()
Number of lineages
slingshot_conditions()
Refitting slingshot per condition